EnhancerDB
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  3. rs202088578[chr17:58448445]
Enhancers that have rs202088578[chr17:58448445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 58447045 58452812 enh32247
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs202088578[chr17:58448445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 58448424 58448445 IRF1 JASPAR yes 55109279
chr17 58448430 58448445 MEF2C JASPAR yes 55109287
chr17 58448431 58448446 MEF2A JASPAR yes 55109289
chr17 58448435 58448449 POU4F1 JASPAR yes 55109294
chr17 58448435 58448451 POU4F2 JASPAR yes 55109295
chr17 58448435 58448451 POU4F3 JASPAR yes 55109296
chr17 58448437 58448448 CDX2 JASPAR yes 55109297
chr17 58448438 58448452 POU4F1 JASPAR yes 55109298
chr17 58448439 58448455 POU4F3 JASPAR yes 55109299
chr17 58448440 58448450 PAX7 JASPAR yes 55109300
chr17 58448441 58448455 POU4F1 JASPAR yes 55109301
chr17 58448442 58448455 DUXA JASPAR yes 55109302
chr17 58448443 58448454 DUX4 JASPAR yes 55109303
chr17 58448443 58448454 PHOX2A JASPAR yes 55109304
chr17 58448443 58448454 PROP1 JASPAR yes 55109305
chr17 58448443 58448459 POU4F2 JASPAR yes 55109306
chr17 58448443 58448459 POU4F3 JASPAR yes 55109307
chr17 58448444 58448454 PAX3 JASPAR yes 55109308
chr17 58448444 58448454 PAX7 JASPAR yes 55109309
chr17 58448445 58448459 POU4F1 JASPAR yes 55109310
chr17 58448445 58448460 HNF1A JASPAR yes 55109311
Genes associated with rs202088578[chr17:58448445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More