EnhancerDB
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  3. rs202104938[chr17:70366390]
Enhancers that have rs202104938[chr17:70366390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs202104938[chr17:70366390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70366382 70366393 HOXA10 JASPAR yes 55778992
chr17 70366383 70366393 ALX3 JASPAR yes 55778993
chr17 70366383 70366393 GSX2 JASPAR yes 55778994
chr17 70366383 70366393 MNX1 JASPAR yes 55778995
chr17 70366384 70366392 BARX1 JASPAR yes 55778996
chr17 70366384 70366392 BSX JASPAR yes 55778997
chr17 70366384 70366392 ISL2 JASPAR yes 55778998
chr17 70366384 70366392 LMX1B JASPAR yes 55778999
chr17 70366384 70366392 MSX1 JASPAR yes 55779000
chr17 70366384 70366392 MSX2 JASPAR yes 55779001
Genes associated with rs202104938[chr17:70366390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More