EnhancerDB
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  3. rs202154950[chr17:57507852]
Enhancers that have rs202154950[chr17:57507852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57488685 57509755 enh17259
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Uterus Heart
Transcript factors that have rs202154950[chr17:57507852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57505689 57508447 ZBTB33 GTRD no Brain (SK-N-SH) 21775032
chr17 57507125 57509289 ZNF274 GTRD no Blood (GM12878) 108276006
chr17 57507209 57508331 ZBTB33 GTRD no Brain (SK-N-SH) 21775040
chr17 57507436 57508052 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21775043
chr17 57507440 57508277 ZBTB33 GTRD no Brain (SK-N-SH) 21775044
chr17 57507465 57507865 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21775046
chr17 57507471 57508015 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21775047
chr17 57507714 57508474 ZBTB33 GTRD no Brain (SK-N-SH) 21775055
chr17 57507768 57508289 ZBTB33 GTRD no Brain (SK-N-SH) 21775056
chr17 57507830 57508402 ZNF143 GTRD no Epithelial (MCF-7) 21775057
chr17 57507832 57507853 REST JASPAR yes 55059411
chr17 57507833 57507852 REST JASPAR yes 55059412
chr17 57507843 57507864 IRF1 JASPAR yes 55059413
chr17 57507846 57507860 SPI1 JASPAR yes 55059414
chr17 57507846 57507867 IRF1 JASPAR yes 55059415
chr17 57507847 57507868 IRF1 JASPAR yes 55059416
chr17 57507848 57507869 IRF1 JASPAR yes 55059417
chr17 57507849 57507864 FOXP1 JASPAR yes 55059418
chr17 57507849 57507870 IRF1 JASPAR yes 55059419
chr17 57507850 57507871 IRF1 JASPAR yes 55059420
chr17 57507851 57507866 FOXP1 JASPAR yes 55059421
chr17 57507851 57507872 IRF1 JASPAR yes 55059422
chr17 57507852 57507867 FOXP1 JASPAR yes 55059423
chr17 57507852 57507873 IRF1 JASPAR yes 55059424
Genes associated with rs202154950[chr17:57507852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More