EnhancerDB
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  3. rs2024501[chr17:70389710]
Enhancers that have rs2024501[chr17:70389710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs2024501[chr17:70389710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70389333 70389952 TCF7L2 GTRD no Colon (HCT116) 21784488
chr17 70389443 70389858 TCF7L2 GTRD no Colon (HCT116) 21784489
chr17 70389486 70389873 ZNF143 GTRD no Epithelial (MCF-7) 21784490
chr17 70389490 70389877 ZNF143 GTRD no Epithelial (MCF-7) 21784491
chr17 70389695 70390071 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21784492
chr17 70389697 70389712 TP53 JASPAR yes 55782300
chr17 70389699 70389719 ESR1 JASPAR yes 55782301
chr17 70389702 70389720 ESR2 JASPAR yes 55782302
Genes associated with rs2024501[chr17:70389710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More