EnhancerDB
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  3. rs2052430[chr12:96599353]
Enhancers that have rs2052430[chr12:96599353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2052430[chr12:96599353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96599346 96599357 USF2 JASPAR yes 123047034
chr12 96599347 96599357 TFEB JASPAR yes 123047035
chr12 96599347 96599357 TFEC JASPAR yes 123047036
chr12 96599347 96599358 USF1 JASPAR yes 123047037
chr12 96599350 96599368 RARA JASPAR yes 123047038
Genes associated with rs2052430[chr12:96599353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More