EnhancerDB
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  3. rs2052549[chr5:78273088]
Enhancers that have rs2052549[chr5:78273088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78266085 78279675 enh55336
Prostate (PC-3) Liver (HepG2) Kidney Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs2052549[chr5:78273088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78273081 78273092 E2F4 JASPAR yes 63636817
chr5 78273081 78273092 E2F6 JASPAR yes 63636818
chr5 78273081 78273095 E2F7 JASPAR yes 63636819
chr5 78273082 78273093 E2F1 JASPAR yes 63636820
Genes associated with rs2052549[chr5:78273088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More