EnhancerDB
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  3. rs2052550[chr5:78272942]
Enhancers that have rs2052550[chr5:78272942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78266085 78279675 enh55336
Prostate (PC-3) Liver (HepG2) Kidney Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs2052550[chr5:78272942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78272935 78272950 MEF2A JASPAR yes 63636791
chr5 78272936 78272951 MEF2C JASPAR yes 63636792
chr5 78272937 78272949 MEF2B JASPAR yes 63636793
chr5 78272938 78272948 MEF2A JASPAR yes 63636794
chr5 78272939 78272943 YY1 TRANSFAC yes 63636795
chr5 78272939 78272948 POU5F1B JASPAR yes 63636796
Genes associated with rs2052550[chr5:78272942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More