EnhancerDB
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  3. rs2060549[chr17:75338829]
Enhancers that have rs2060549[chr17:75338829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75332780 75369235 enh17400
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2060549[chr17:75338829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75337932 75339236 ZNF274 GTRD no Bone Marrow (K562) 21790193
chr17 75337932 75339236 ZNF274 GTRD no Bone Marrow (K562) 108298427
chr17 75337948 75339290 ZNF274 GTRD no Blood (GM12878) 21790194
chr17 75337948 75339290 ZNF274 GTRD no Blood (GM12878) 108298428
chr17 75338004 75339745 ZNF274 GTRD no Blood (GM12878) 21790195
chr17 75338004 75339745 ZNF274 GTRD no Blood (GM12878) 108298429
chr17 75338021 75339137 ZNF274 GTRD no Blood (GM12878) 21790196
chr17 75338021 75339137 ZNF274 GTRD no Blood (GM12878) 108298430
chr17 75338033 75339204 ZNF274 GTRD no Blood (GM12878) 21790197
chr17 75338033 75339204 ZNF274 GTRD no Blood (GM12878) 108298431
chr17 75338034 75339205 ZNF274 GTRD no Blood (GM12878) 21790198
chr17 75338034 75339205 ZNF274 GTRD no Blood (GM12878) 108298432
chr17 75338038 75339053 ZNF143 GTRD no Epithelial (MCF-7) 21790199
chr17 75338038 75339053 ZNF143 GTRD no Epithelial (MCF-7) 108298433
chr17 75338053 75339189 ZNF274 GTRD no Blood (GM12878) 21790200
chr17 75338053 75339189 ZNF274 GTRD no Blood (GM12878) 108298434
chr17 75338091 75338925 TEF1 GTRD no Bone (Osteoblast) 21790201
chr17 75338091 75338925 TEF1 GTRD no Bone (Osteoblast) 108298435
chr17 75338107 75339055 ZNF274 GTRD no Bone Marrow (K562) 21790202
chr17 75338107 75339055 ZNF274 GTRD no Bone Marrow (K562) 108298436
chr17 75338129 75339195 ZNF274 GTRD no Blood (GM12878) 21790203
chr17 75338129 75339195 ZNF274 GTRD no Blood (GM12878) 108298437
chr17 75338163 75339016 ZNF143 GTRD no Epithelial (MCF-7) 21790204
chr17 75338163 75339016 ZNF143 GTRD no Epithelial (MCF-7) 108298438
chr17 75338177 75339040 GATA3 GTRD no Thymus 21790205
chr17 75338177 75339040 GATA3 GTRD no Thymus 108298439
chr17 75338194 75339104 ZNF274 GTRD no Blood (GM12878) 21790206
chr17 75338194 75339104 ZNF274 GTRD no Blood (GM12878) 108298440
chr17 75338203 75339187 ZNF274 GTRD no Bone Marrow (K562) 21790207
chr17 75338203 75339187 ZNF274 GTRD no Bone Marrow (K562) 108298441
chr17 75338213 75339195 ZNF274 GTRD no Bone Marrow (K562) 21790208
chr17 75338213 75339195 ZNF274 GTRD no Bone Marrow (K562) 108298442
chr17 75338219 75339056 ZNF274 GTRD no Bone Marrow (K562) 21790209
chr17 75338219 75339056 ZNF274 GTRD no Bone Marrow (K562) 108298443
chr17 75338267 75339065 ZBTB33 GTRD no Brain (SK-N-SH) 21790210
chr17 75338267 75339065 ZBTB33 GTRD no Brain (SK-N-SH) 108298444
chr17 75338276 75338897 ZNF274 GTRD no Bone Marrow (K562) 21790211
chr17 75338276 75338897 ZNF274 GTRD no Bone Marrow (K562) 108298445
chr17 75338288 75339207 ZNF274 GTRD no Blood (GM12878) 21790212
chr17 75338288 75339207 ZNF274 GTRD no Blood (GM12878) 108298446
chr17 75338293 75339019 ZBTB33 GTRD no Brain (SK-N-SH) 21790213
chr17 75338293 75339019 ZBTB33 GTRD no Brain (SK-N-SH) 108298447
chr17 75338331 75339054 ZNF143 GTRD no Epithelial (MCF-7) 21790217
chr17 75338331 75339054 ZNF143 GTRD no Epithelial (MCF-7) 108298452
chr17 75338339 75338930 ZNF143 GTRD no Epithelial (MCF-7) 21790218
chr17 75338339 75338930 ZNF143 GTRD no Epithelial (MCF-7) 108298453
chr17 75338341 75338867 ZNF143 GTRD no Epithelial (MCF-7) 21790219
chr17 75338341 75338867 ZNF143 GTRD no Epithelial (MCF-7) 108298454
chr17 75338353 75338870 ZNF274 GTRD no Bone Marrow (K562) 21790222
chr17 75338353 75338870 ZNF274 GTRD no Bone Marrow (K562) 108298457
chr17 75338356 75339077 ZNF274 GTRD no Bone Marrow (K562) 21790223
chr17 75338356 75339077 ZNF274 GTRD no Bone Marrow (K562) 108298458
chr17 75338363 75338860 ZNF274 GTRD no Bone Marrow (K562) 21790225
chr17 75338363 75338860 ZNF274 GTRD no Bone Marrow (K562) 108298460
chr17 75338368 75338909 ZNF274 GTRD no Bone Marrow (K562) 21790226
chr17 75338368 75338909 ZNF274 GTRD no Bone Marrow (K562) 108298461
chr17 75338383 75339304 ZNF274 GTRD no Bone Marrow (K562) 21790227
chr17 75338383 75339304 ZNF274 GTRD no Bone Marrow (K562) 108298462
chr17 75338490 75338999 ZNF274 GTRD no Bone Marrow (K562) 21790229
chr17 75338490 75338999 ZNF274 GTRD no Bone Marrow (K562) 108298464
chr17 75338825 75338830 SP1 TRANSFAC yes 56069633
Genes associated with rs2060549[chr17:75338829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More