EnhancerDB
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Enhancers that have rs2079946[chr19:2970793]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2960165 2972415 enh17857
Cervix (HeLa-S3) Epithelial (MCF-7) Liver Lung Blood (OCI-LY7) Stomach Placenta Lung (PC-9) Pancreas Uterus Thymus Heart
Transcript factors that have rs2079946[chr19:2970793]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2969854 2970905 ZNF274 GTRD no Cervix (HeLa-S3) 21838374
chr19 2969864 2970976 ZNF143 GTRD no Epithelial (MCF-7) 21838375
chr19 2969870 2971005 ZNF143 GTRD no Epithelial (MCF-7) 21838376
chr19 2970007 2970874 ZNF274 GTRD no Cervix (HeLa-S3) 21838377
chr19 2970109 2970863 ZNF274 GTRD no Cervix (HeLa-S3) 21838387
chr19 2970129 2970803 ZNF143 GTRD no Epithelial (MCF-7) 21838390
chr19 2970240 2970891 ZNF143 GTRD no Epithelial (MCF-7) 21838397
chr19 2970265 2970969 ZNF143 GTRD no Epithelial (MCF-7) 21838398
chr19 2970421 2970937 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21838400
chr19 2970690 2970976 ZNF143 GTRD no Epithelial (MCF-7) 21838402
chr19 2970790 2970795 SP1 TRANSFAC yes 112105443
chr19 2970790 2970799 HIC2 JASPAR yes 112105444
chr19 2970793 2970797 LFA1 TRANSFAC yes 112105445
Genes associated with rs2079946[chr19:2970793], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More