EnhancerDB
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  3. rs2087607[chr5:171578338]
Enhancers that have rs2087607[chr5:171578338]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs2087607[chr5:171578338]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171578323 171578344 IRF1 JASPAR yes 67768410
chr5 171578325 171578346 IRF1 JASPAR yes 67768411
chr5 171578329 171578350 IRF1 JASPAR yes 67768412
chr5 171578330 171578345 FOXP1 JASPAR yes 67768413
chr5 171578332 171578353 IRF1 JASPAR yes 67768414
chr5 171578333 171578354 IRF1 JASPAR yes 67768415
chr5 171578334 171578349 FOXP1 JASPAR yes 67768416
chr5 171578334 171578355 IRF1 JASPAR yes 67768417
chr5 171578338 171578352 IRF7 JASPAR yes 67768418
chr5 171578338 171578359 IRF1 JASPAR yes 67768419
Genes associated with rs2087607[chr5:171578338], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More