EnhancerDB
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Enhancers that have rs2111540[chr12:110326453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110319345 110332839 enh29978
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Blood (T-cell) Stomach
Transcript factors that have rs2111540[chr12:110326453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110326120 110326496 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21572179
chr12 110326125 110326495 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21572180
chr12 110326131 110326471 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21572181
chr12 110326134 110326478 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21572182
chr12 110326151 110326471 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21572183
chr12 110326157 110326613 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21572184
chr12 110326187 110326543 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21572186
chr12 110326202 110326598 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21572187
chr12 110326251 110326518 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21572188
chr12 110326443 110326453 HOXA13 JASPAR yes 123666953
chr12 110326443 110326453 HOXB13 JASPAR yes 123666954
Genes associated with rs2111540[chr12:110326453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More