EnhancerDB
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  3. rs2143290[chr1:169088679]
Enhancers that have rs2143290[chr1:169088679]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 169076205 169091718 enh12359
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs2143290[chr1:169088679]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 169088668 169088685 BCL6B JASPAR yes 32984713
chr1 169088679 169088684 NFY TRANSFAC yes 32984714
Genes associated with rs2143290[chr1:169088679], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More