EnhancerDB
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  3. rs2153904[chr1:205642790]
Enhancers that have rs2153904[chr1:205642790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205631965 205647955 enh50152
Large Intestine Prostate (RWPE1) Liver Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2153904[chr1:205642790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205642782 205642798 NFYA JASPAR yes 34778417
chr1 205642785 205642800 NFYB JASPAR yes 34778418
Genes associated with rs2153904[chr1:205642790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 205626979 205649587 - SLC45A3 ENSG00000158715.5 205649587 0 Breast 0.451641 1768