EnhancerDB
  1. Home
  2. SNP
  3. rs2169612[chr4:88817414]
Enhancers that have rs2169612[chr4:88817414]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 88815409 88820202 enh36794
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Astrocyte Muscle (A673) Lung (PC-9) Neural Stem Cells (H9)
chr4 88817372 88817671 vista45355
VISTA
Transcript factors that have rs2169612[chr4:88817414]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 88817402 88817420 NFYA JASPAR yes 49256719
chr4 88817402 88817420 NFYA JASPAR yes 91139297
chr4 88817405 88817414 VENTX JASPAR yes 49256720
chr4 88817405 88817414 VENTX JASPAR yes 91139298
chr4 88817405 88817415 EMX2 JASPAR yes 49256721
chr4 88817405 88817415 EN2 JASPAR yes 49256722
chr4 88817405 88817415 ESX1 JASPAR yes 49256723
chr4 88817405 88817415 GBX1 JASPAR yes 49256724
chr4 88817405 88817415 GBX2 JASPAR yes 49256725
chr4 88817405 88817415 GSX1 JASPAR yes 49256726
chr4 88817405 88817415 HESX1 JASPAR yes 49256727
chr4 88817405 88817415 HOXA2 JASPAR yes 49256728
chr4 88817405 88817415 HOXB3 JASPAR yes 49256729
chr4 88817405 88817415 LBX2 JASPAR yes 49256730
chr4 88817405 88817415 LHX2 JASPAR yes 49256731
chr4 88817405 88817415 MIXL1 JASPAR yes 49256732
chr4 88817405 88817415 RAX JASPAR yes 49256733
chr4 88817405 88817415 EMX2 JASPAR yes 91139299
chr4 88817405 88817415 EN2 JASPAR yes 91139300
chr4 88817405 88817415 ESX1 JASPAR yes 91139301
chr4 88817405 88817415 GBX1 JASPAR yes 91139302
chr4 88817405 88817415 GBX2 JASPAR yes 91139303
chr4 88817405 88817415 GSX1 JASPAR yes 91139304
chr4 88817405 88817415 HESX1 JASPAR yes 91139305
chr4 88817405 88817415 HOXA2 JASPAR yes 91139306
chr4 88817405 88817415 HOXB3 JASPAR yes 91139307
chr4 88817405 88817415 LBX2 JASPAR yes 91139308
chr4 88817405 88817415 LHX2 JASPAR yes 91139309
chr4 88817405 88817415 MIXL1 JASPAR yes 91139310
chr4 88817405 88817415 RAX JASPAR yes 91139311
chr4 88817406 88817414 BARX1 JASPAR yes 49256737
chr4 88817406 88817414 BSX JASPAR yes 49256738
chr4 88817406 88817414 EN1 JASPAR yes 49256739
chr4 88817406 88817414 ISX JASPAR yes 49256740
chr4 88817406 88817414 LHX9 JASPAR yes 49256741
chr4 88817406 88817414 MSX1 JASPAR yes 49256742
chr4 88817406 88817414 MSX2 JASPAR yes 49256743
chr4 88817406 88817414 PRRX1 JASPAR yes 49256744
chr4 88817406 88817414 RAX2 JASPAR yes 49256745
chr4 88817406 88817414 SHOX JASPAR yes 49256746
chr4 88817406 88817414 BARX1 JASPAR yes 91139315
chr4 88817406 88817414 BSX JASPAR yes 91139316
chr4 88817406 88817414 EN1 JASPAR yes 91139317
chr4 88817406 88817414 ISX JASPAR yes 91139318
chr4 88817406 88817414 LHX9 JASPAR yes 91139319
chr4 88817406 88817414 MSX1 JASPAR yes 91139320
chr4 88817406 88817414 MSX2 JASPAR yes 91139321
chr4 88817406 88817414 PRRX1 JASPAR yes 91139322
chr4 88817406 88817414 RAX2 JASPAR yes 91139323
chr4 88817406 88817414 SHOX JASPAR yes 91139324
chr4 88817408 88817784 TCF7L2 UCSC Txn Factor no Conserved 108533087
Genes associated with rs2169612[chr4:88817414], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More