EnhancerDB
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  3. rs2173623[chr3:55596916]
Enhancers that have rs2173623[chr3:55596916]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 55596805 55635295 enh7228
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Muscle (A673) Placenta Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2173623[chr3:55596916]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 55596908 55596920 PKNOX1 JASPAR yes 2525484
chr3 55596908 55596920 PKNOX2 JASPAR yes 2525485
chr3 55596908 55596920 TGIF1 JASPAR yes 2525486
chr3 55596908 55596920 TGIF2 JASPAR yes 2525487
chr3 55596909 55596918 SNAI2 JASPAR yes 2525488
chr3 55596909 55596919 FIGLA JASPAR yes 2525489
chr3 55596909 55596919 ID4 JASPAR yes 2525490
chr3 55596909 55596919 TCF3 JASPAR yes 2525491
chr3 55596909 55596919 TCF4 JASPAR yes 2525492
chr3 55596911 55596922 TBX2 JASPAR yes 2525493
chr3 55596912 55596922 TBR1 JASPAR yes 2525494
Genes associated with rs2173623[chr3:55596916], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More