EnhancerDB
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  3. rs2179654[chr1:209607771]
Enhancers that have rs2179654[chr1:209607771]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209599449 209611412 enh12618
Bone Marrow (K562) Prostate (PC-3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2179654[chr1:209607771]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209601620 209608746 POLR2A UCSC Txn Factor no Conserved 107865814
chr1 209606804 209608167 AR GTRD no Prostate (PC-3) 21375468
chr1 209606804 209608167 AR GTRD no Prostate (PC-3) 107865828
chr1 209606914 209608339 ZNF274 GTRD no Blood (GM12878) 107865829
chr1 209606931 209608250 ZNF274 GTRD no Bone Marrow (K562) 21375469
chr1 209606931 209608250 ZNF274 GTRD no Bone Marrow (K562) 107865830
chr1 209607116 209607894 ZNF274 GTRD no Bone Marrow (K562) 21375470
chr1 209607322 209607839 ZNF274 GTRD no Bone Marrow (K562) 21375471
chr1 209607335 209607897 ZNF274 GTRD no Bone Marrow (K562) 21375472
chr1 209607740 209608337 ZNF274 GTRD no Bone Marrow (K562) 21375476
chr1 209607765 209607776 NFE2 JASPAR yes 34975834
Genes associated with rs2179654[chr1:209607771], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More