EnhancerDB
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  3. rs2197398[chr12:46562674]
Enhancers that have rs2197398[chr12:46562674]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs2197398[chr12:46562674]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46561810 46563550 ZNF274 GTRD no Cervix (HeLa-S3) 21540896
chr12 46561850 46563426 ZBTB33 GTRD no Lung (A549) 21540897
chr12 46561856 46563440 ZBTB33 GTRD no Lung (A549) 21540898
chr12 46561860 46564028 ZNF274 GTRD no Cervix (HeLa-S3) 21540899
chr12 46561872 46562785 ZNF143 GTRD no Epithelial (MCF-7) 21540900
chr12 46561899 46563472 ZBTB33 GTRD no Lung (A549) 21540901
chr12 46561927 46563699 ZNF274 GTRD no Cervix (HeLa-S3) 21540903
chr12 46561943 46563519 ZNF274 GTRD no Cervix (HeLa-S3) 21540904
chr12 46561944 46563473 ZNF274 GTRD no Cervix (HeLa-S3) 21540905
chr12 46561967 46563539 ZNF274 GTRD no Cervix (HeLa-S3) 21540906
chr12 46562010 46563556 ZNF274 GTRD no Cervix (HeLa-S3) 21540907
chr12 46562060 46563346 ZBTB33 GTRD no Lung (A549) 21540908
chr12 46562096 46563348 ZBTB33 GTRD no Brain (SK-N-SH) 21540909
chr12 46562106 46563340 ZNF274 GTRD no Cervix (HeLa-S3) 21540910
chr12 46562108 46563317 ZBTB33 GTRD no Brain (SK-N-SH) 21540911
chr12 46562111 46562698 ZBTB33 GTRD no Lung (A549) 21540912
chr12 46562116 46563556 ZNF274 GTRD no Cervix (HeLa-S3) 21540913
chr12 46562129 46563537 ZBTB33 GTRD no Lung (A549) 21540914
chr12 46562166 46563275 ZBTB33 GTRD no Lung (A549) 21540915
chr12 46562168 46563335 ZBTB33 GTRD no Brain (SK-N-SH) 21540916
chr12 46562191 46563345 ZNF274 GTRD no Cervix (HeLa-S3) 21540918
chr12 46562196 46563283 ZNF274 GTRD no Cervix (HeLa-S3) 21540919
chr12 46562207 46562680 ZNF274 GTRD no Cervix (HeLa-S3) 21540920
chr12 46562233 46563347 ZBTB33 GTRD no Lung (A549) 21540921
chr12 46562267 46563313 ZBTB33 GTRD no Lung (A549) 21540922
chr12 46562460 46563320 ZBTB33 GTRD no Brain (SK-N-SH) 21540924
chr12 46562558 46563295 ZBTB33 GTRD no Brain (SK-N-SH) 21540925
chr12 46562561 46563391 ZNF274 GTRD no Cervix (HeLa-S3) 21540926
chr12 46562593 46563301 ZNF274 GTRD no Cervix (HeLa-S3) 21540927
chr12 46562614 46563254 ZBTB33 GTRD no Brain (SK-N-SH) 21540928
chr12 46562622 46563400 ZBTB33 GTRD no Brain (SK-N-SH) 21540929
chr12 46562623 46563350 ZBTB33 GTRD no Brain (SK-N-SH) 21540930
chr12 46562634 46563096 MYOD GTRD no Muscle (Myoblast) 21540931
chr12 46562646 46563387 ZBTB33 GTRD no Brain (SK-N-SH) 21540932
chr12 46562655 46563300 ZBTB33 GTRD no Brain (SK-N-SH) 21540933
chr12 46562662 46563277 ZNF274 GTRD no Cervix (HeLa-S3) 21540934
chr12 46562664 46562679 LEF1 JASPAR yes 120601024
chr12 46562665 46562679 TCF7L2 JASPAR yes 120601025
chr12 46562667 46563286 ZNF274 GTRD no Cervix (HeLa-S3) 21540935
chr12 46562669 46563286 ZNF274 GTRD no Cervix (HeLa-S3) 21540936
chr12 46562672 46563268 ZBTB33 GTRD no Brain (SK-N-SH) 21540937
chr12 46562673 46562687 TCF7L2 JASPAR yes 120601026
Genes associated with rs2197398[chr12:46562674], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More