EnhancerDB
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Enhancers that have rs2245226[chr12:65930602]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65910512 65934055 enh14789
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Pancreas (Panc1) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus
Transcript factors that have rs2245226[chr12:65930602]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65929477 65930980 ZNF274 GTRD no Liver (HepG2) 108042042
chr12 65929527 65931211 ZNF274 GTRD no Liver (HepG2) 108042043
chr12 65929532 65930791 ZNF274 GTRD no Liver (HepG2) 108042044
chr12 65929574 65930757 ZNF274 GTRD no Liver (HepG2) 108042045
chr12 65929578 65930775 ZNF274 GTRD no Liver (HepG2) 108042046
chr12 65929587 65930717 ZBTB33 GTRD no Lung (A549) 108042047
chr12 65929651 65930723 ZNF274 GTRD no Liver (HepG2) 108042048
chr12 65929675 65930854 ZNF274 GTRD no Liver (HepG2) 108042049
chr12 65929715 65930706 ZNF274 GTRD no Liver (HepG2) 108042050
chr12 65929735 65930775 ZNF274 GTRD no Liver (HepG2) 108042051
chr12 65929869 65930726 ZNF274 GTRD no Liver (HepG2) 108042052
chr12 65929895 65930716 ZNF274 GTRD no Liver (HepG2) 108042053
chr12 65929937 65930800 ZNF274 GTRD no Liver (HepG2) 108042054
chr12 65929941 65930717 ZNF274 GTRD no Liver (HepG2) 108042055
chr12 65929974 65930742 ZNF274 GTRD no Liver (HepG2) 108042056
chr12 65929975 65930745 ZNF274 GTRD no Liver (HepG2) 108042057
chr12 65929978 65930689 ZNF274 GTRD no Liver (HepG2) 108042058
chr12 65929984 65930715 ZNF274 GTRD no Liver (HepG2) 108042059
chr12 65929985 65930872 FLI1 GTRD no Muscle (A673) 108042060
chr12 65930007 65930703 ZNF274 GTRD no Liver (HepG2) 108042061
chr12 65930020 65930796 ZNF274 GTRD no Liver (HepG2) 108042062
chr12 65930028 65930690 ZBTB33 GTRD no Lung (A549) 108042063
chr12 65930051 65930666 ZNF274 GTRD no Liver (HepG2) 108042064
chr12 65930107 65931112 FLI1 GTRD no Muscle (A673) 108042065
chr12 65930123 65930711 ZNF274 GTRD no Liver (HepG2) 108042066
chr12 65930392 65930986 ZNF274 GTRD no Liver (HepG2) 108042067
chr12 65930414 65931093 TCF7L2 UCSC Txn Factor no Conserved 108042068
chr12 65930496 65931036 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108042069
chr12 65930497 65931093 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21553027
chr12 65930497 65931093 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108042070
chr12 65930565 65931069 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21553028
chr12 65930565 65931069 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108042071
chr12 65930577 65930953 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21553029
chr12 65930577 65930953 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108042072
chr12 65930590 65930611 IRF1 JASPAR yes 121468383
chr12 65930593 65930607 IRF7 JASPAR yes 121468384
chr12 65930594 65930608 STAT1 JASPAR yes 121468385
chr12 65930594 65930609 PRDM1 JASPAR yes 121468386
chr12 65930594 65930609 STAT2 JASPAR yes 121468387
chr12 65930595 65930607 IRF1 JASPAR yes 121468388
chr12 65930596 65930610 POU1F1 JASPAR yes 121468389
chr12 65930596 65930611 FOXP1 JASPAR yes 121468390
chr12 65930596 65930611 MEF2C JASPAR yes 121468391
chr12 65930596 65930617 IRF1 JASPAR yes 121468392
chr12 65930597 65930610 POU2F2 JASPAR yes 121468393
chr12 65930597 65930618 IRF1 JASPAR yes 121468394
chr12 65930598 65930609 FOXC1 JASPAR yes 121468395
chr12 65930598 65930610 FOXC2 JASPAR yes 121468396
chr12 65930599 65930613 IRF7 JASPAR yes 121468397
chr12 65930601 65930613 IRF1 JASPAR yes 121468398
chr12 65930601 65930616 STAT2 JASPAR yes 121468399
chr12 65930602 65930986 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21553030
chr12 65930602 65930986 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108042073
Genes associated with rs2245226[chr12:65930602], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More