EnhancerDB
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  3. rs2246001[chr12:48223668]
Enhancers that have rs2246001[chr12:48223668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 48214553 48225280 enh14688
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs2246001[chr12:48223668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 48223657 48223678 IRF1 JASPAR yes 120720684
chr12 48223665 48223675 TEAD1 JASPAR yes 120720685
chr12 48223665 48223675 TEAD4 JASPAR yes 120720686
chr12 48223666 48223674 TEAD3 JASPAR yes 120720687
Genes associated with rs2246001[chr12:48223668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More