EnhancerDB
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  3. rs2248962[chr1:178550960]
Enhancers that have rs2248962[chr1:178550960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178528505 178560595 enh755
Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Heart
Transcript factors that have rs2248962[chr1:178550960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178550674 178551010 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107847428
chr1 178550744 178551014 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107847429
chr1 178550748 178550992 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107847430
chr1 178550953 178550974 ZNF263 JASPAR yes 33425891
chr1 178550958 178550962 YY1 TRANSFAC yes 33425892
Genes associated with rs2248962[chr1:178550960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More