EnhancerDB
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  3. rs2250180[chr10:29548450]
Enhancers that have rs2250180[chr10:29548450]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29540165 29549115 enh13090
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Ovary Lung (PC-9) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs2250180[chr10:29548450]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29548439 29548450 CDX2 JASPAR yes 126304958
chr10 29548440 29548451 HOXA10 JASPAR yes 126304959
chr10 29548440 29548451 HOXC11 JASPAR yes 126304960
chr10 29548440 29548451 HOXC12 JASPAR yes 126304961
chr10 29548440 29548451 HOXD12 JASPAR yes 126304962
chr10 29548441 29548450 CDX1 JASPAR yes 126304963
chr10 29548441 29548451 HOXC10 JASPAR yes 126304964
chr10 29548441 29548451 HOXD11 JASPAR yes 126304965
chr10 29548448 29548459 CDX2 JASPAR yes 126304966
chr10 29548449 29548460 HOXA10 JASPAR yes 126304967
chr10 29548450 29548459 CDX1 JASPAR yes 126304968
chr10 29548450 29548460 HOXA13 JASPAR yes 126304969
chr10 29548450 29548460 HOXB13 JASPAR yes 126304970
chr10 29548450 29548460 HOXD13 JASPAR yes 126304971
Genes associated with rs2250180[chr10:29548450], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More