EnhancerDB
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  3. rs2253980[chr14:62082992]
Enhancers that have rs2253980[chr14:62082992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 62059145 62089628 enh3259
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr14 62082808 62083073 vista18048
VISTA
Transcript factors that have rs2253980[chr14:62082992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 62082747 62083072 ESR1 UCSC Txn Factor no Conserved 108106419
chr14 62082985 62083002 ZNF410 JASPAR yes 107562235
chr14 62082985 62083002 ZNF410 JASPAR yes 115869398
chr14 62082987 62082997 HOXA13 JASPAR yes 107562236
chr14 62082987 62082997 HOXB13 JASPAR yes 107562237
chr14 62082987 62082997 HOXD13 JASPAR yes 107562238
chr14 62082987 62082997 HOXA13 JASPAR yes 115869399
chr14 62082987 62082997 HOXB13 JASPAR yes 115869400
chr14 62082987 62082997 HOXD13 JASPAR yes 115869401
chr14 62082987 62082998 HOXA10 JASPAR yes 107562239
chr14 62082987 62082998 HOXA10 JASPAR yes 115869402
chr14 62082988 62082997 CDX1 JASPAR yes 107562240
chr14 62082988 62082997 CDX1 JASPAR yes 115869403
chr14 62082988 62082999 CDX2 JASPAR yes 107562241
chr14 62082988 62082999 CDX2 JASPAR yes 115869404
chr14 62082992 62083007 MEF2A JASPAR yes 107562242
chr14 62082992 62083007 MEF2A JASPAR yes 115869405
Genes associated with rs2253980[chr14:62082992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More