EnhancerDB
  1. Home
  2. SNP
  3. rs2268342[chr1:16277537]
Enhancers that have rs2268342[chr1:16277537]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16272606 16295457 enh83
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Heart
chr1 16277350 16278224 vista506
VISTA
Transcript factors that have rs2268342[chr1:16277537]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16277523 16277537 GLIS2 JASPAR yes 27016991
chr1 16277523 16277537 GLIS3 JASPAR yes 27016992
chr1 16277523 16277537 GLIS2 JASPAR yes 118237850
chr1 16277523 16277537 GLIS3 JASPAR yes 118237851
chr1 16277525 16277545 RREB1 JASPAR yes 27016993
chr1 16277525 16277545 RREB1 JASPAR yes 118237852
chr1 16277526 16277546 RREB1 JASPAR yes 27016994
chr1 16277526 16277546 RREB1 JASPAR yes 118237853
chr1 16277529 16277549 RREB1 JASPAR yes 27016995
chr1 16277529 16277549 RREB1 JASPAR yes 118237854
chr1 16277530 16277540 TEAD1 JASPAR yes 27016996
chr1 16277530 16277540 TEAD4 JASPAR yes 27016997
chr1 16277530 16277540 TEAD1 JASPAR yes 118237855
chr1 16277530 16277540 TEAD4 JASPAR yes 118237856
chr1 16277537 16277551 GLIS2 JASPAR yes 27016998
chr1 16277537 16277551 GLIS3 JASPAR yes 27016999
chr1 16277537 16277551 GLIS2 JASPAR yes 118237857
chr1 16277537 16277551 GLIS3 JASPAR yes 118237858
Genes associated with rs2268342[chr1:16277537], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More