EnhancerDB
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  3. rs227719[chr17:54780140]
Enhancers that have rs227719[chr17:54780140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54773925 54780615 enh17237
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs227719[chr17:54780140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54780111 54780368 ZNF143 GTRD no Epithelial (MCF-7) 21772982
chr17 54780135 54780141 ZNF354C JASPAR yes 54905207
chr17 54780139 54780148 ZEB1 JASPAR yes 54905208
chr17 54780140 54780150 FIGLA JASPAR yes 54905209
chr17 54780140 54780150 TCF4 JASPAR yes 54905210
Genes associated with rs227719[chr17:54780140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More