EnhancerDB
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  3. rs227725[chr17:54778620]
Enhancers that have rs227725[chr17:54778620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54773925 54780615 enh17237
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs227725[chr17:54778620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54778613 54778623 OLIG2 JASPAR yes 54904938
chr17 54778613 54778623 OLIG3 JASPAR yes 54904939
chr17 54778614 54778626 YY1 JASPAR yes 54904940
Genes associated with rs227725[chr17:54778620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More