EnhancerDB
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Enhancers that have rs227727[chr17:54776955]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54773925 54780615 enh17237
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs227727[chr17:54776955]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54776463 54777349 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21772939
chr17 54776531 54777181 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772943
chr17 54776561 54777091 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772944
chr17 54776598 54776974 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772945
chr17 54776604 54777044 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21772946
chr17 54776633 54777003 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772947
chr17 54776711 54777067 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772949
chr17 54776723 54777093 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772950
chr17 54776724 54777194 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21772951
chr17 54776733 54777383 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772952
chr17 54776748 54777204 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772953
chr17 54776749 54777484 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772954
chr17 54776756 54777038 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772955
chr17 54776760 54777236 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772956
chr17 54776763 54777423 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772957
chr17 54776810 54777274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772958
chr17 54776826 54777222 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772959
chr17 54776827 54777203 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772960
chr17 54776835 54777175 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772961
chr17 54776848 54777232 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772962
chr17 54776851 54777171 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772963
chr17 54776854 54777218 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772964
chr17 54776854 54777258 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772965
chr17 54776857 54777187 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772966
chr17 54776865 54777480 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21772967
chr17 54776883 54777253 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772968
chr17 54776886 54777266 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772969
chr17 54776911 54777060 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772970
chr17 54776913 54777446 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21772971
chr17 54776916 54777226 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21772972
chr17 54776950 54776955 GATA2 JASPAR yes 54904685
chr17 54776954 54777430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772973
Genes associated with rs227727[chr17:54776955], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 54671060 54672951 + NOG ENSG00000183691.4 54671060 104004 Esophagus 2.64157e-14 16065