EnhancerDB
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  3. rs2279352[chr16:85497597]
Enhancers that have rs2279352[chr16:85497597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 85497347 85497685 vista23311
VISTA
Transcript factors that have rs2279352[chr16:85497597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85495350 85497605 TCF7L2 GTRD no Colon (HCT116) 108214729
chr16 85495350 85497605 TCF7L2 GTRD no Colon (HCT116) 108214730
chr16 85497097 85499239 ZNF274 GTRD no Bone Marrow (K562) 21726327
chr16 85497097 85499239 ZNF274 GTRD no Bone Marrow (K562) 108214758
chr16 85497097 85499239 ZNF274 GTRD no Bone Marrow (K562) 108214759
chr16 85497097 85499239 ZNF274 GTRD no Bone Marrow (K562) 108214760
chr16 85497134 85497658 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21726329
chr16 85497134 85497658 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214763
chr16 85497134 85497658 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214764
chr16 85497167 85497633 TCF7L2 GTRD no Colon (HCT116) 108214765
chr16 85497167 85497633 TCF7L2 GTRD no Colon (HCT116) 108214766
chr16 85497333 85498279 ZNF274 GTRD no Bone Marrow (K562) 21726330
chr16 85497333 85498279 ZNF274 GTRD no Bone Marrow (K562) 108214767
chr16 85497533 85498306 ZNF143 GTRD no Epithelial (MCF-7) 21726331
chr16 85497533 85498306 ZNF143 GTRD no Epithelial (MCF-7) 108214768
chr16 85497591 85497606 TFAP2A JASPAR yes 12064729
chr16 85497591 85497606 TFAP2A JASPAR yes 49408558
chr16 85497593 85497607 NR2F1 JASPAR yes 12064730
chr16 85497593 85497607 NR2F1 JASPAR yes 49408559
Genes associated with rs2279352[chr16:85497597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More