EnhancerDB
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  3. rs2280580[chr3:119347400]
Enhancers that have rs2280580[chr3:119347400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 119345925 119366915 enh20840
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Thymus Heart
Transcript factors that have rs2280580[chr3:119347400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 119347392 119347410 ESR2 JASPAR yes 5170687
chr3 119347399 119347416 RARA JASPAR yes 5170688
chr3 119347399 119347416 RXRA JASPAR yes 5170689
Genes associated with rs2280580[chr3:119347400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More