EnhancerDB
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  3. rs2291424[chr1:245129462]
Enhancers that have rs2291424[chr1:245129462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 245118747 245130790 enh12854
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Thyroid Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Thymus Heart
Transcript factors that have rs2291424[chr1:245129462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 245128506 245130235 AR GTRD no Prostate (PC-3) 21405703
chr1 245129458 245129468 GSX2 JASPAR yes 36756403
chr1 245129459 245129467 BSX JASPAR yes 36756404
chr1 245129459 245129468 VENTX JASPAR yes 36756405
chr1 245129462 245129482 PPARG JASPAR yes 36756406
Genes associated with rs2291424[chr1:245129462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More