EnhancerDB
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  3. rs2294938[chr1:209603996]
Enhancers that have rs2294938[chr1:209603996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209599449 209611412 enh12618
Bone Marrow (K562) Prostate (PC-3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2294938[chr1:209603996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209601620 209608746 POLR2A UCSC Txn Factor no Conserved 107865814
chr1 209603868 209604362 SOX2 GTRD no Neural Stem Cells (H9) 21375451
chr1 209603968 209604393 SOX2 GTRD no Neural Stem Cells (H9) 21375452
chr1 209603982 209604370 SOX2 GTRD no Neural Stem Cells (H9) 21375453
chr1 209603983 209603996 TFAP2A JASPAR yes 34975340
chr1 209603984 209603999 STAT1 JASPAR yes 34975341
chr1 209603989 209604004 JUND JASPAR yes 34975343
chr1 209603990 209604003 JUN JASPAR yes 34975344
chr1 209603996 209604007 FLI1 JASPAR yes 34975345
chr1 209603996 209604009 ELF3 JASPAR yes 34975346
Genes associated with rs2294938[chr1:209603996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More