EnhancerDB
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  3. rs2298205[chr1:180135286]
Enhancers that have rs2298205[chr1:180135286]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180124885 180142635 enh12422
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Stomach Muscle (A673) Placenta Lung (PC-9) Pancreas Muscle (Myotube) Heart
Transcript factors that have rs2298205[chr1:180135286]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180135276 180135296 RREB1 JASPAR yes 33505405
chr1 180135277 180135287 SP1 JASPAR yes 33505406
chr1 180135277 180135297 RREB1 JASPAR yes 33505407
chr1 180135278 180135288 SP1 JASPAR yes 33505408
chr1 180135278 180135298 RREB1 JASPAR yes 33505409
chr1 180135278 180135299 ZNF263 JASPAR yes 33505410
chr1 180135281 180135286 SP1 TRANSFAC yes 33505411
chr1 180135281 180135301 RREB1 JASPAR yes 33505412
chr1 180135284 180135298 PLAG1 JASPAR yes 33505413
chr1 180135285 180135295 SP1 JASPAR yes 33505414
chr1 180135285 180135299 PLAG1 JASPAR yes 33505415
Genes associated with rs2298205[chr1:180135286], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More