EnhancerDB
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  3. rs2300553[chr12:96618763]
Enhancers that have rs2300553[chr12:96618763]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2300553[chr12:96618763]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96618754 96618764 BHLHE40 JASPAR yes 123049657
chr12 96618754 96618764 BHLHE41 JASPAR yes 123049658
chr12 96618754 96618764 MLXIPL JASPAR yes 123049659
chr12 96618754 96618764 MLX JASPAR yes 123049660
chr12 96618754 96618764 MNT JASPAR yes 123049661
chr12 96618754 96618764 TFE3 JASPAR yes 123049662
chr12 96618755 96618765 MAX JASPAR yes 123049663
chr12 96618761 96618776 JUND JASPAR yes 123049667
Genes associated with rs2300553[chr12:96618763], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More