EnhancerDB
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  3. rs230272[chr1:40292221]
Enhancers that have rs230272[chr1:40292221]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs230272[chr1:40292221]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40292205 40292226 IRF1 JASPAR yes 28294106
chr1 40292206 40292221 FOXP1 JASPAR yes 28294107
chr1 40292207 40292222 IRF9 JASPAR yes 28294108
chr1 40292209 40292223 STAT1 JASPAR yes 28294109
chr1 40292209 40292224 STAT2 JASPAR yes 28294110
chr1 40292217 40292227 TFCP2 JASPAR yes 28294111
Genes associated with rs230272[chr1:40292221], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More