EnhancerDB
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  3. rs230273[chr1:40292698]
Enhancers that have rs230273[chr1:40292698]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs230273[chr1:40292698]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40292683 40292701 SRF JASPAR yes 28294220
chr1 40292693 40292703 RELA JASPAR yes 28294221
chr1 40292693 40292704 NFKB1 JASPAR yes 28294222
chr1 40292696 40292707 E2F6 JASPAR yes 28294223
Genes associated with rs230273[chr1:40292698], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More