EnhancerDB
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  3. rs230302[chr1:40280217]
Enhancers that have rs230302[chr1:40280217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs230302[chr1:40280217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40280204 40280219 MEF2C JASPAR yes 28292286
chr1 40280205 40280220 MEF2A JASPAR yes 28292287
chr1 40280206 40280218 MEF2A JASPAR yes 28292288
chr1 40280206 40280218 MEF2B JASPAR yes 28292289
chr1 40280206 40280218 MEF2D JASPAR yes 28292290
chr1 40280207 40280217 MEF2A JASPAR yes 28292291
chr1 40280208 40280223 FOXP1 JASPAR yes 28292292
chr1 40280214 40280220 TBP TRANSFAC yes 28292293
chr1 40280214 40280225 PROP1 JASPAR yes 28292294
Genes associated with rs230302[chr1:40280217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More