EnhancerDB
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  3. rs2312330[chr1:15513047]
Enhancers that have rs2312330[chr1:15513047]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2312330[chr1:15513047]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15513033 15513048 HNF4G JASPAR yes 26968397
chr1 15513034 15513048 NR2F1 JASPAR yes 26968398
chr1 15513034 15513049 HNF4A JASPAR yes 26968399
chr1 15513045 15513052 NKX3-1 JASPAR yes 26968401
chr1 15513046 15513054 FOXC1 JASPAR yes 26968402
Genes associated with rs2312330[chr1:15513047], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More