EnhancerDB
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  3. rs2339360[chr5:171586805]
Enhancers that have rs2339360[chr5:171586805]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs2339360[chr5:171586805]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171586797 171586812 FOXP1 JASPAR yes 67769525
chr5 171586800 171586811 FOXP2 JASPAR yes 67769526
chr5 171586802 171586811 SRY JASPAR yes 67769527
chr5 171586802 171586823 IRF1 JASPAR yes 67769528
chr5 171586804 171586819 IRF9 JASPAR yes 67769529
chr5 171586805 171586819 IRF7 JASPAR yes 67769530
Genes associated with rs2339360[chr5:171586805], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More