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- rs2369844[chr16:1223679]
Enhancers that have rs2369844[chr16:1223679]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
1204345 |
1228235 |
enh31663 |
|
|
Transcript factors that have rs2369844[chr16:1223679]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
1221732
|
1223951
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684328
|
|
|
chr16
|
1221732
|
1223951
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171277
|
|
|
chr16
|
1221758
|
1224153
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684329
|
|
|
chr16
|
1221758
|
1224153
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171279
|
|
|
chr16
|
1222182
|
1223745
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108171283
|
|
|
chr16
|
1223679
|
1223689
|
SP1
|
JASPAR
|
yes
|
|
9141789
|
|
Genes associated with rs2369844[chr16:1223679], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
230452
|
231180
|
+
|
HBQ1
|
ENSG00000086506.2
|
230452
|
992499
|
Thyroid
|
0.0784732
|
14335
|
|
|
chr16
|
1203241
|
1271771
|
+
|
CACNA1H
|
ENSG00000196557.6
|
1203241
|
0
|
Stomach
|
0.209469
|
14379
|
|