EnhancerDB
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  3. rs2370317[chr16:29304414]
Enhancers that have rs2370317[chr16:29304414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29294585 29314235 enh16624
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs2370317[chr16:29304414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29304148 29304712 MYOD GTRD no Muscle (Myoblast) 108191441
chr16 29304292 29304631 ZNF143 GTRD no Epithelial (MCF-7) 21702222
chr16 29304292 29304631 ZNF143 GTRD no Epithelial (MCF-7) 108191442
chr16 29304297 29304727 ZNF274 GTRD no Bone Marrow (K562) 21702223
chr16 29304297 29304727 ZNF274 GTRD no Bone Marrow (K562) 108191443
chr16 29304299 29304523 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702224
chr16 29304299 29304523 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108191444
chr16 29304300 29304490 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21702225
chr16 29304300 29304490 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108191445
chr16 29304400 29304419 CTCF JASPAR yes 10258396
chr16 29304411 29304423 E2F1 JASPAR yes 10258397
Genes associated with rs2370317[chr16:29304414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 30116131 30125177 - GDPD3 ENSG00000102886.10 30125177 811717 Uterus 0.030575 14731