EnhancerDB
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  3. rs2374402[chr12:104960778]
Enhancers that have rs2374402[chr12:104960778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104958166 105005515 enh2574
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Heart
Transcript factors that have rs2374402[chr12:104960778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104960766 104960779 POU2F2 JASPAR yes 123391939
chr12 104960771 104960783 POU2F1 JASPAR yes 123391940
chr12 104960771 104960784 POU3F3 JASPAR yes 123391941
chr12 104960771 104960785 POU1F1 JASPAR yes 123391942
chr12 104960772 104960784 POU3F1 JASPAR yes 123391943
chr12 104960772 104960784 POU3F2 JASPAR yes 123391944
chr12 104960772 104960785 POU2F2 JASPAR yes 123391945
chr12 104960773 104960781 FOXL1 JASPAR yes 123391946
chr12 104960773 104960782 POU3F4 JASPAR yes 123391947
chr12 104960773 104960782 POU5F1B JASPAR yes 123391948
chr12 104960773 104960784 FOXB1 JASPAR yes 123391949
Genes associated with rs2374402[chr12:104960778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More