EnhancerDB
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  3. rs2377858[chr1:31981858]
Enhancers that have rs2377858[chr1:31981858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31947645 31983179 enh198
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs2377858[chr1:31981858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31981847 31981860 SCRT2 JASPAR yes 27936349
chr1 31981847 31981862 SCRT1 JASPAR yes 27936350
chr1 31981851 31981860 SNAI2 JASPAR yes 27936351
chr1 31981851 31981861 FIGLA JASPAR yes 27936352
chr1 31981851 31981861 ID4 JASPAR yes 27936353
chr1 31981851 31981861 TCF3 JASPAR yes 27936354
chr1 31981851 31981861 TCF4 JASPAR yes 27936355
Genes associated with rs2377858[chr1:31981858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More