EnhancerDB
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  3. rs2387420[chr1:10956645]
Enhancers that have rs2387420[chr1:10956645]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10948885 10972333 enh11498
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2387420[chr1:10956645]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10956635 10956645 ELK1 JASPAR yes 26758050
chr1 10956637 10956647 ERG JASPAR yes 26758051
chr1 10956638 10956653 NFYB JASPAR yes 26758052
chr1 10956639 10956645 ETS1 JASPAR yes 26758053
chr1 10956639 10956653 ONECUT3 JASPAR yes 26758054
chr1 10956640 10956656 NFYA JASPAR yes 26758055
chr1 10956641 10956659 NFYA JASPAR yes 26758056
chr1 10956641 10956659 NR3C1 JASPAR yes 26758057
chr1 10956645 10956649 H1TF2 TRANSFAC yes 26758058
chr1 10956645 10956649 NFE TRANSFAC yes 26758059
chr1 10956645 10956649 SRF TRANSFAC yes 26758060
Genes associated with rs2387420[chr1:10956645], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More