EnhancerDB
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  3. rs2400890[chr5:148988823]
Enhancers that have rs2400890[chr5:148988823]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148972625 148988975 enh8792
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs2400890[chr5:148988823]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148988822 148988836 POU4F1 JASPAR yes 66830445
chr5 148988822 148988838 POU4F2 JASPAR yes 66830446
chr5 148988822 148988838 POU4F3 JASPAR yes 66830447
Genes associated with rs2400890[chr5:148988823], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More