EnhancerDB
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  3. rs2401950[chr16:1346875]
Enhancers that have rs2401950[chr16:1346875]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs2401950[chr16:1346875]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1345180 1348586 TCF7L2 GTRD no Colon (HCT116) 21684673
chr16 1345180 1348586 TCF7L2 GTRD no Colon (HCT116) 108171370
chr16 1345533 1347780 TCF7L2 GTRD no Colon (HCT116) 21684675
chr16 1345533 1347780 TCF7L2 GTRD no Colon (HCT116) 108171371
chr16 1345606 1348781 TCF7L2 GTRD no Colon (HCT116) 21684676
chr16 1345606 1348781 TCF7L2 GTRD no Colon (HCT116) 108171372
chr16 1345682 1347975 ZBTB33 GTRD no Lung (A549) 108171373
chr16 1345931 1347517 TCF7L2 GTRD no Colon (HCT116) 21684679
chr16 1345931 1347517 TCF7L2 GTRD no Colon (HCT116) 108171374
chr16 1345965 1348344 TCF7L2 GTRD no Colon (HCT116) 21684680
chr16 1345965 1348344 TCF7L2 GTRD no Colon (HCT116) 108171375
chr16 1345981 1347382 ZNF274 GTRD no Bone Marrow (K562) 108171376
chr16 1345989 1346912 TCF7L2 GTRD no Colon (HCT116) 21684681
chr16 1346258 1348430 ZNF143 GTRD no Epithelial (MCF-7) 21684682
chr16 1346258 1348430 ZNF143 GTRD no Epithelial (MCF-7) 108171377
chr16 1346288 1347884 ZNF143 GTRD no Epithelial (MCF-7) 21684683
chr16 1346288 1347884 ZNF143 GTRD no Epithelial (MCF-7) 108171378
chr16 1346399 1348554 ZNF143 GTRD no Epithelial (MCF-7) 21684684
chr16 1346399 1348554 ZNF143 GTRD no Epithelial (MCF-7) 108171379
chr16 1346412 1347923 ZNF143 GTRD no Epithelial (MCF-7) 21684685
chr16 1346412 1347923 ZNF143 GTRD no Epithelial (MCF-7) 108171380
chr16 1346509 1347945 ZNF274 GTRD no Blood (GM12878) 108171381
chr16 1346597 1347088 TCF7L2 GTRD no Colon (HCT116) 21684686
chr16 1346608 1347742 ZNF274 GTRD no Bone Marrow (K562) 108171382
chr16 1346635 1347379 ZNF274 GTRD no Blood (GM12878) 108171383
chr16 1346644 1347712 ZBTB33 GTRD no Brain (SK-N-SH) 108171384
chr16 1346669 1347694 ZBTB33 GTRD no Lung (A549) 108171385
chr16 1346699 1347443 ZNF143 GTRD no Epithelial (MCF-7) 21684687
chr16 1346699 1347443 ZNF143 GTRD no Epithelial (MCF-7) 108171386
chr16 1346699 1347543 ZNF274 GTRD no Bone Marrow (K562) 108171387
chr16 1346710 1347438 ZBTB33 GTRD no Lung (A549) 108171388
chr16 1346737 1347728 ZBTB33 GTRD no Lung (A549) 108171389
chr16 1346757 1347478 ZBTB33 GTRD no Lung (A549) 108171390
chr16 1346764 1347570 ZNF274 GTRD no Cervix (HeLa-S3) 21684688
chr16 1346764 1347570 ZNF274 GTRD no Cervix (HeLa-S3) 108171391
chr16 1346789 1347428 ZNF143 GTRD no Epithelial (MCF-7) 21684689
chr16 1346789 1347428 ZNF143 GTRD no Epithelial (MCF-7) 108171392
chr16 1346802 1347389 ZBTB33 GTRD no Lung (A549) 108171393
chr16 1346811 1347386 ZNF274 GTRD no Bone Marrow (K562) 108171394
chr16 1346814 1347372 ZNF274 GTRD no Bone Marrow (K562) 108171395
chr16 1346824 1347553 ZBTB33 GTRD no Lung (A549) 108171396
chr16 1346837 1347625 ZNF274 GTRD no Blood (GM12878) 108171397
chr16 1346853 1347423 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21684690
chr16 1346853 1347423 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108171398
chr16 1346857 1347369 ZNF274 GTRD no Liver (HepG2) 21684691
chr16 1346858 1347439 ZNF274 GTRD no Bone Marrow (K562) 108171399
chr16 1346860 1346881 ZNF263 JASPAR yes 9149768
chr16 1346862 1347332 ZNF274 GTRD no Liver (HepG2) 21684692
chr16 1346871 1347489 ZBTB33 GTRD no Lung (A549) 108171400
Genes associated with rs2401950[chr16:1346875], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More