EnhancerDB
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  3. rs2408783[chr12:47752238]
Enhancers that have rs2408783[chr12:47752238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47747943 47766515 enh2318
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs2408783[chr12:47752238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47751063 47752401 ZNF143 GTRD no Epithelial (MCF-7) 21543456
chr12 47751109 47752466 ZNF143 GTRD no Epithelial (MCF-7) 21543457
chr12 47751489 47756458 ZNF274 GTRD no Cervix (HeLa-S3) 108028766
chr12 47751489 47756458 ZNF274 GTRD no Cervix (HeLa-S3) 108028767
chr12 47751538 47752487 ZNF143 GTRD no Epithelial (MCF-7) 21543458
chr12 47751702 47752387 ZNF143 GTRD no Epithelial (MCF-7) 21543459
chr12 47751950 47756166 AR GTRD no Prostate (PC-3) 21543460
chr12 47751950 47756166 AR GTRD no Prostate (PC-3) 108028768
chr12 47751950 47756166 AR GTRD no Prostate (PC-3) 108028769
chr12 47752097 47755403 ZNF274 GTRD no Cervix (HeLa-S3) 108028770
chr12 47752097 47755403 ZNF274 GTRD no Cervix (HeLa-S3) 108028771
chr12 47752148 47754607 P63 GTRD no Skin (Keratinocyte) 108028772
chr12 47752163 47755158 ZNF274 GTRD no Cervix (HeLa-S3) 108028773
chr12 47752202 47755158 ZNF274 GTRD no Cervix (HeLa-S3) 108028774
chr12 47752224 47752238 PLAG1 JASPAR yes 120700049
chr12 47752235 47752240 SP1 TRANSFAC yes 120700052
Genes associated with rs2408783[chr12:47752238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More