EnhancerDB
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  3. rs2473239[chr1:22590487]
Enhancers that have rs2473239[chr1:22590487]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22573285 22604835 enh11598
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Ovary Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2473239[chr1:22590487]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22590468 22590488 RREB1 JASPAR yes 27356650
chr1 22590469 22590489 RREB1 JASPAR yes 27356651
chr1 22590470 22590491 ZNF263 JASPAR yes 27356653
chr1 22590471 22590491 RREB1 JASPAR yes 27356654
chr1 22590472 22590492 RREB1 JASPAR yes 27356655
chr1 22590473 22590493 RREB1 JASPAR yes 27356656
chr1 22590474 22590494 RREB1 JASPAR yes 27356657
chr1 22590484 22590489 SP1 TRANSFAC yes 27356659
chr1 22590485 22590495 ZNF740 JASPAR yes 27356660
chr1 22590487 22590498 NFKB1 JASPAR yes 27356661
Genes associated with rs2473239[chr1:22590487], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More