EnhancerDB
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  3. rs2473350[chr1:15742300]
Enhancers that have rs2473350[chr1:15742300]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15740198 15759915 enh26553
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2473350[chr1:15742300]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15741010 15743090 TCF7L2 GTRD no Colon (HCT116) 107802187
chr1 15742284 15742302 IRF2 JASPAR yes 26983734
chr1 15742286 15742301 SOX21 JASPAR yes 26983735
chr1 15742300 15742305 GATA2 JASPAR yes 26983738
Genes associated with rs2473350[chr1:15742300], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More