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- rs2492280[chr1:178557894]
Enhancers that have rs2492280[chr1:178557894]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
178528505 |
178560595 |
enh755 |
|
|
Transcript factors that have rs2492280[chr1:178557894]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
178557880
|
178557895
|
MEF2A
|
JASPAR
|
yes
|
|
33426742
|
|
|
chr1
|
178557881
|
178557896
|
MEF2C
|
JASPAR
|
yes
|
|
33426743
|
|
|
chr1
|
178557884
|
178557894
|
HOXA13
|
JASPAR
|
yes
|
|
33426744
|
|
|
chr1
|
178557884
|
178557894
|
HOXB13
|
JASPAR
|
yes
|
|
33426745
|
|
|
chr1
|
178557884
|
178557894
|
HOXD13
|
JASPAR
|
yes
|
|
33426746
|
|
|
chr1
|
178557884
|
178557895
|
HOXA10
|
JASPAR
|
yes
|
|
33426747
|
|
|
chr1
|
178557884
|
178557895
|
HOXD12
|
JASPAR
|
yes
|
|
33426748
|
|
|
chr1
|
178557885
|
178557894
|
CDX1
|
JASPAR
|
yes
|
|
33426749
|
|
|
chr1
|
178557885
|
178557896
|
CDX2
|
JASPAR
|
yes
|
|
33426750
|
|
Genes associated with rs2492280[chr1:178557894], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
178511887
|
178518024
|
+
|
C1orf220
|
ENSG00000213057.4
|
178511887
|
39870
|
Thyroid
|
0.134339
|
1600
|
|