EnhancerDB
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  3. rs2493860[chr1:178541492]
Enhancers that have rs2493860[chr1:178541492]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178528505 178560595 enh755
Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Heart
Transcript factors that have rs2493860[chr1:178541492]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178541072 178541579 ZNF274 GTRD no Blood (GM12878) 21352549
chr1 178541482 178541495 SMAD2 JASPAR yes 33424381
chr1 178541485 178541495 TBR1 JASPAR yes 33424382
chr1 178541486 178541496 TBX21 JASPAR yes 33424383
chr1 178541487 178541495 MGA JASPAR yes 33424384
chr1 178541487 178541495 TBX15 JASPAR yes 33424385
chr1 178541487 178541495 TBX1 JASPAR yes 33424386
chr1 178541487 178541495 TBX4 JASPAR yes 33424387
chr1 178541487 178541495 TBX5 JASPAR yes 33424388
chr1 178541487 178541496 ZEB1 JASPAR yes 33424389
chr1 178541487 178541499 PKNOX1 JASPAR yes 33424390
chr1 178541487 178541499 TGIF1 JASPAR yes 33424391
chr1 178541487 178541500 ZBTB18 JASPAR yes 33424392
chr1 178541488 178541498 FIGLA JASPAR yes 33424393
chr1 178541488 178541498 ID4 JASPAR yes 33424394
chr1 178541488 178541498 TCF3 JASPAR yes 33424395
chr1 178541488 178541498 TCF4 JASPAR yes 33424396
chr1 178541489 178541498 SNAI2 JASPAR yes 33424397
chr1 178541490 178541495 USF2 TRANSFAC yes 33424398
Genes associated with rs2493860[chr1:178541492], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More