EnhancerDB
  1. Home
  2. SNP
  3. rs2500259[chr1:3258661]
Enhancers that have rs2500259[chr1:3258661]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2500259[chr1:3258661]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3258651 3258662 NFKB1 JASPAR yes 26282421
chr1 3258653 3258663 RELA JASPAR yes 26282422
chr1 3258656 3258672 ZNF143 JASPAR yes 26282423
Genes associated with rs2500259[chr1:3258661], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More